MolProbity Ramachandran analysis

MolProbity Ramachandran analysis
4V9G, model 1
General case
180
AB 13
THR
B7
42
ASN
A7
42
ASN
B8 195
8 TYR
AM
A8 8 ASN
TYR
BL 23 ASP
AL 23 ASP
0
B4 17 GLN
AX 15 ARG
AV
AD 1544ARG
LEU
A8 44
20LEU
HIS
AT
A5
LEU
BV
1544ARG
AZ
40
SER
BL
100
TRP
AB
53
AH
46ARG
ASP
BF 119
40
SER
AL
PHE
BS AH
12 THRLEU
A4 1115LEU
BD 10 ILE
AD 10 ILE
BE
AE 1212THR
THR
A4
BM
BY 195
812
12TYR
TYR
THR
ASN
BL 202 LYS
AY
THR
AY
8TYR
B4
12
THR
B4
812
AK 8BU
TYR
AW
BM
612
8LEU
SER
A4
THR
BW
LEU
AL 202 LYS
BU
TYR
THR
BK
888TYR
AQ
86LEU
TYR
BY
BU
66TYR
LEU
B9
88AU
TYR
8BO
TYR
A9
A6
8TYR
TYR
AM 8 SER
BH
138
ALA
B6
8
TYR
BM
29
ARG
A3 47 SER
AU 47
47 SER
TRP
AN
AB 18 ASN
Psi
Isoleucine and valine
180
Psi
AT 43 TRP
AL
AL
234
155
LEU
ASP
B9
31
AT 142
47 SER
SER
AL
TRP
AH
SER
AL 19
240
ALA
A2
26
LEU
AE
29
LEU
BD 18 VAL
A1 18
18VAL
VAL
AD
AK 18
43VAL
ILE
B1
BT 43 TRP
BM 159
89 LEU
LEU
AM
89
AL
ASN
0
AP 43 TRP
BF
18
VAL
B4
B5 50
43
18 VAL
ILE
VAL
AB
AG
ILE
BX
1643
VAL
AO
41
VAL
BO 41 VAL
AN 43 TRP
BZ 40 SER
A3 40 SER
BW
18
GLU
AT
41TYR
TYR
BB
26
GLN
AM
255
THR
B1
41
AM
292 ASP
AB
26
GLN
AB 12 ASN AM
BM
255
THR
AD
TYR
BJ
41
110
TYR
LYS
AF
41
TYR
AN 48 ALA
AJ
4141
TYR
AM
101
TYR
AN 41
41 TYR
TYR
A1
4 SER
AW 2 ASP AU
A5A7
37
SER
41
B5
37
B7SER
41TYR
TYR
AH 52 ASN
AI
SER
BH 444
ASN
BJ 34 ILE
BM154
154
ILE
AM
ILE
BM
57
A2 274
22VAL
VAL
AM
VAL
AJ 43 TRP
B2 43 TRPAX 9 MET
A2 A9
43 TRP
BS 13 ASP AS 12 THR
12
THR
AX
A5
42
42ASN
ASN
B5
4242
ASN
BB
22
TRP
BP
ASN
A5
MET
BF
42 ASN
AP
42
ASN
B9
AJ
12
99MET
THR
B2 47
47
BV
SER
42
ASN
BP
SER
A2
47
SER
BZAZ42 42
ASN
ASN
AL 279 ILE
BM 6238
BB
ILEILE
AM BM
290290
VAL
VAL
A2 10 ILE
AM 24 VAL
AH 249 LYS
BH 249 LYS
-180
0
Phi
180
Pre-proline
180
B7 10 ILE
BM 24 VAL
-180
-180
A7 10 ILE
BM 10AM
VAL 6 ILE
-180
0
Phi
180
Glycine
180
B5 38 THR
A5 38 THR
Psi
Psi
AH 150 GLY
BB 52 GLY
AM 230 GLY
BM 230 GLY
BL 112 GLY
AU 45 ARG
AM
AL 141
112GLY
GLY
0
0
AH
AH186
125GLY
GLY
AH 235 GLY
BL 83AB
GLY36 GLY
A1 12 ASP
B7
38
THR
AL38
117
ILE
A7
THR
ASP
B31212
12
ASP
A7A3
BD
ASP
B2
12
ASP
BJ12
12
ASP
A2
ASP
BP
12
ASP
B1AH
12BB
ASP
AL
135
ARG
AD
12
ASP
14
ASN
171
ILE
BHAJ17112ILE
ASP
BS 45
AFARG
12
12 ASP
ASP
AS AN
45
ARG
BN
BF 12
12ASP
ASP
BM 56 GLY
A9B8
26726
GLY
AU
GLY
GLY
BU
26
GLY
AM 302 GLY
BL 76 GLY
BH 125 GLY
BM 288 GLY
BZ 38 THR
AZ 38 THR
BL 78 ALA
-180
-180
-180
0
Phi
180
Trans proline
180
0
Phi
180
Phi
180
Cis proline
180
AH 49 PRO
BZ 39 PRO
AZ 39 PRO
A7 39 PRO
B7 39 PRO
Psi
-180
Psi
BL 118 PRO
AK6146
PRO
AL
PRO
B1
BK 13
46PRO
PRO
0
0
BT
AX 13
39 PRO
PRO
B4 46 PRO
AT 111
13 PRO
BH
PRO
BO 200
46 PRO
AL
PRO
BM BL
15 200
PROPRO
AM
AL 15
79PRO
PRO
BL 79 PRO
AM
BH 108
192 PRO
PRO
-180
-180
-180
70.4% (2941/4176) of all residues were in favored (98%) regions.
94.3% (3937/4176) of all residues were in allowed (>99.8%) regions.
There were 239 outliers (phi, psi):
AB 12 ASN (-154.4, -90.7)
AB 13 THR (44.2, 142.9)
AB 18 ASN (19.5, 64.2)
AB 26 GLN (-61.2, -89.9)
AB 36 GLY (-149.9, -26.7)
AB 50 VAL (-154.1, -16.2)
AB 53 ARG (-167.5, -34.5)
BB 6 ILE (-74.5, -80.9)
BB 14 ASN (-102.9, -57.9)
BB 22 TRP (68.0, -82.4)
BB 26 GLN (-58.0, -82.6)
BB 52 GLY (-63.6, 80.0)
A5 9 MET (60.4, -86.4)
A5 37 SER (-81.9, -116.3)
A5 38 THR (52.9, 129.6)
A5 42 ASN (73.4, -79.2)
A5 44 LEU (-162.1, -16.9)
AT 13 PRO (-83.5, -53.9)
AT 41 TYR (-68.1, -81.7)
AT 43 TRP (32.5, 39.7)
AT 44 LEU (-166.7, -13.1)
AT 47 SER (-67.0, 24.4)
AV 15 ARG (-176.7, -0.8)
AX 9 MET (87.3, -61.2)
AX 15 ARG (-168.0, 4.6)
AX 39 PRO (-91.4, -38.5)
AX 42 ASN (65.8, -80.0)
A3 12 ASP (-133.6, -41.4)
A3 40 SER (-163.7, -74.8)
A3 47 SER (-64.1, 76.3)
A7 10 ILE (28.7, -128.1)
A7 12 ASP (-141.9, -44.3)
A7 38 THR (-136.8, -33.2)
A7 39 PRO (-22.1, 64.1)
A7 41 TYR (-69.1, -120.7)
A7 42 ASN (69.6, 139.4)
AD 10 ILE (66.8, 162.7)
AD 12 ASP (-139.7, -57.9)
AD 18 VAL (-164.8, 14.8)
AD 41 TYR (-75.9, -93.4)
AD 44 LEU (-170.2, -5.5)
AF 12 ASP (-140.1, -67.9)
AF 41 TYR (-80.0, -96.1)
A1 12 ASP (-144.8, -25.0)
A1 18 VAL (-159.6, 17.3)
A1 41 TYR (-80.7, -110.0)
AJ 9 MET (58.3, -88.4)
AJ 12 ASP (-114.6, -61.9)
AJ 41 TYR (-78.7, -98.4)
AJ 43 TRP (50.9, -45.3)
A2 10 ILE (-116.0, -121.4)
A2 12 ASP (-133.9, -50.0)
A2 22 VAL (-64.3, 26.1)
A2 26 LEU (-63.3, 12.8)
A2 43 TRP (30.0, -72.7)
A2 47 SER (36.7, -96.8)
AN 12 ASP (-140.3, -71.4)
AN 41 TYR (-79.4, -105.3)
AN 43 TRP (61.6, -22.0)
AN 47 SER (-61.9, 66.9)
AN 48 ALA (-158.0, -98.9)
AP 42 ASN (58.5, -87.0)
AP 43 TRP (56.8, -5.6)
AZ 38 THR (52.3, -159.6)
AZ 39 PRO (-24.8, 78.9)
AZ 40 SER (-162.0, -32.9)
AZ 42 ASN (85.8, -101.8)
AS 12 THR (175.0, -76.0)
AS 45 ARG (-156.9, -74.3)
A9 8 TYR (6.4, 87.2)
A9 12 THR (46.3, -75.3)
A9 26 GLY (-146.2, -53.3)
AO 41 VAL (-166.0, -27.9)
AQ 8 TYR (62.3, 94.9)
A6 8 TYR (13.0, 85.0)
AU 4 SER (-84.5, -113.7)
AU 8 TYR (32.5, 88.2)
AU 26 GLY (-136.7, -54.5)
AU 45 ARG (-165.4, 33.3)
AU 47 TRP (-59.5, 69.6)
AW 2 ASP (-152.7, -114.3)
AW 6 LEU (58.2, 100.9)
AY 8 TYR (64.1, 106.8)
AY 12 THR (66.9, 107.4)
A4 8 TYR (65.0, 111.9)
A4 11 LEU (-165.1, -53.4)
A4 12 THR (62.5, 99.1)
A8 8 TYR (76.7, 125.2)
A8 20 HIS (-160.8, -11.8)
AE 12 THR (167.1, 128.9)
AE 29 LEU (-63.3, 10.0)
AG 43 ILE (-153.9, -17.8)
AI 4 SER (-82.1, -136.4)
AK 8 TYR (19.4, 101.3)
AK 43 ILE (-152.3, 4.7)
AK 46 PRO (-50.3, 15.2)
AH 15 LEU (-161.0, -51.4)
AH 19 SER (-68.5, 16.2)
AH 46 ASP (-162.9, -35.1)
AH 49 PRO (-43.3, 104.2)
AH 52 ASN (-167.1, -135.1)
AH 125 GLY (170.1, -10.3)
AH 150 GLY (161.3, 86.1)
AH 171 ILE (-122.5, -59.2)
AH 186 GLY (162.4, -8.6)
AH 235 GLY (-153.5, -20.3)
AH 249 LYS (78.1, -136.7)
AL 23 ASP (-168.2, 25.1)
AL 61 PRO (-59.7, 12.4)
AL 79 PRO (-60.5, -106.3)
AL 112 GLY (171.2, 24.8)
AL 117 ILE (-125.6, -32.0)
AL 119 PHE (-161.6, -43.1)
AL 135 ARG (-118.6, -56.9)
AL 142 TRP (-71.4, 22.4)
AL 155 ASP (-67.6, 28.8)
AL 159 ASN (-50.4, -8.9)
0
Phi
180
-180
0
AL 200 PRO (-66.7, -72.4)
AL 202 LYS (153.2, 98.4)
AL 234 LEU (-70.1, 28.6)
AL 240 ALA (-58.4, 13.5)
AL 279 ILE (55.3, -59.5)
AM 6 ILE (-75.1, -150.6)
AM 8 SER (92.1, 84.0)
AM 15 PRO (-68.2, -102.1)
AM 24 VAL (-79.7, -125.6)
AM 89 LEU (-50.4, -7.1)
AM 101 TYR (-76.8, -104.8)
AM 108 PRO (-77.0, -156.7)
AM 110 LYS (-81.7, -94.5)
AM 141 GLY (165.5, 25.8)
AM 154 ILE (-85.8, 34.5)
AM 195 ASN (67.1, 131.0)
AM 230 GLY (179.6, 54.8)
AM 255 THR (-71.6, -84.8)
AM 274 VAL (-72.7, 23.7)
AM 290 VAL (-113.3, -97.9)
AM 292 ASP (-47.8, -87.8)
AM 302 GLY (-174.8, -60.2)
B5 18 VAL (-150.4, -15.3)
B5 37 SER (-87.3, -121.5)
B5 38 THR (57.9, 137.3)
B5 42 ASN (55.9, -81.5)
BT 13 PRO (-91.8, -33.6)
BT 43 TRP (41.5, 24.3)
BV 15 ARG (-171.8, -19.5)
BV 42 ASN (67.9, -91.7)
BX 16 VAL (-161.8, -23.0)
B3 12 ASP (-127.7, -43.0)
B7 10 ILE (34.9, -145.7)
B7 38 THR (-130.7, -29.1)
B7 39 PRO (-22.8, 56.7)
B7 41 TYR (-63.8, -125.3)
B7 42 ASN (69.4, 140.4)
BD 10 ILE (64.7, 174.6)
BD 12 ASP (-141.6, -44.2)
BD 18 VAL (-166.7, 28.4)
BF 12 ASP (-127.4, -80.6)
BF 18 VAL (-151.1, -12.9)
BF 40 SER (-160.4, -40.5)
BF 42 ASN (97.6, -86.3)
B1 12 ASP (-132.7, -54.6)
B1 13 PRO (-59.1, 8.5)
B1 18 VAL (-153.1, -1.5)
B1 41 TYR (-72.3, -85.2)
BJ 12 ASP (-117.9, -48.6)
BJ 34 ILE (-84.8, 49.3)
BJ 41 TYR (-80.8, -94.2)
B2 12 ASP (-131.1, -45.3)
B2 43 TRP (32.9, -58.1)
B2 47 SER (41.6, -91.9)
BN 12 ASP (-134.1, -77.1)
BP 12 ASP (-122.3, -51.7)
BP 42 ASN (61.3, -85.8)
BP 47 SER (32.6, -93.4)
BZ 38 THR (76.8, -107.1)
BZ 39 PRO (-38.3, 93.0)
BZ 40 SER (154.1, -40.9)
BZ 42 ASN (74.1, -99.5)
BS 12 THR (-176.1, -46.3)
BS 13 ASP (117.0, -74.4)
BS 45 ARG (-162.3, -67.7)
B9 8 TYR (4.5, 88.3)
B9 12 THR (55.3, -88.7)
B9 31 SER (-68.8, 26.6)
BO 6 LEU (59.4, 91.3)
BO 41 VAL (-148.6, -35.0)
BO 46 PRO (-66.0, -71.0)
B6 8 TYR (16.5, 81.9)
BU 6 LEU (56.6, 90.1)
BU 8 TYR (49.7, 96.6)
BU 12 THR (63.6, 96.6)
BU 26 GLY (-132.7, -55.4)
BW 6 LEU (64.5, 98.2)
BW 18 GLU (-60.3, -78.6)
BY 8 TYR (52.1, 93.5)
BY 12 THR (68.4, 111.3)
B4 8 TYR (58.8, 104.9)
B4 12 THR (65.0, 105.4)
B4 17 GLN (-165.0, 9.8)
B4 43 ILE (-151.5, -15.5)
B4 46 PRO (-92.1, -45.6)
B8 7 GLY (-137.9, -54.3)
B8 8 TYR (72.7, 134.9)
BE 12 THR (161.8, 132.2)
BK 8 TYR (45.5, 95.9)
BK 46 PRO (-53.5, 8.2)
BH 44 ASN (-78.7, -138.8)
BH 111 PRO (-85.5, -56.8)
BH 125 GLY (-146.5, -77.3)
BH 138 ALA (-51.4, 81.9)
BH 171 ILE (-125.9, -60.1)
BH 192 PRO (-71.4, -158.7)
BH 249 LYS (94.4, -151.3)
BL 23 ASP (-178.8, 36.0)
BL 76 GLY (-161.4, -70.9)
BL 78 ALA (-157.3, -161.8)
BL 79 PRO (-64.4, -151.0)
BL 83 GLY (-177.9, -31.2)
BL 100 TRP (-164.1, -33.6)
BL 112 GLY (153.4, 43.9)
BL 118 PRO (-62.7, 34.9)
BL 200 PRO (-72.5, -99.1)
BL 202 LYS (179.8, 110.1)
BM 8 SER (65.2, 100.6)
BM 10 VAL (-109.1, -151.3)
BM 15 PRO (-90.3, -100.0)
BM 24 VAL (-73.7, -171.5)
BM 29 ARG (-64.5, 80.0)
BM 56 GLY (-146.4, -47.7)
BM 57 VAL (-72.3, 30.8)
BM 89 LEU (-48.6, -5.8)
BM 154 ILE (-75.3, 36.3)
BM 195 ASN (66.8, 111.5)
BM 230 GLY (136.7, 51.8)
BM 238 ILE (-71.4, -76.7)
BM 255 THR (-68.7, -92.6)
BM 288 GLY (-164.7, -83.2)
BM 290 VAL (-96.0, -98.0)
http://kinemage.biochem.duke.edu
Lovell, Davis, et al. Proteins 50:437 (2003)