Ramachandran Plots

MolProbity Ramachandran analysis
4MEY, model 1
General case
180
Isoleucine and valine
180
K 45 LYS
K 15 ASN
JASN
718
60D
718 SER
SER
J 596
1215
GLU
JKE
LEU
ASN
C 60
892
GLU
CI 941
909 LYS
LYS
B 13ICLEU
G
H 188
188 GLU
GLU
746
A
B
746ALA
ALA
JD 880
880VAL
VAL
I D169
148
LYS
GLU
A 319
319 GLU
GLU
J 1169 THR B
ID 40
595
GLU
ALA
D 179 LYS
C 9 LYS
940
1154
DLYS
GLU
1169
ASP THR
JCC557
Psi
A 229 GLU
0
B
Psi
346
TYR
ICG346
231TYR
PHE
E 16 ARG
E 80 LEU
E 79 GLU
D 1208 ASP
C 61 SER
D 1160
157
SER
THR
JB
1160
SER
G
H
B
A 93
93
93 GLN
GLN
9JDLYS
539SER
SER
539
B 191 ARG
A 191 ARG
-180
B 195 ARG
I 1155 VAL
E 59 ILE
114
VAL
K I 59
ILE
C 1040 ASP
LF 606
606 VAL
VAL
C 1155 VAL
D 1176 VAL
J 1176 VAL
JD 151
151MET
MET
LF 488
488 LEU
LEU
EA 45
LYS
230
ALA
Phi
C 114 VAL
B 192 VAL
-180
180
Pre-proline
Psi
D 825 VAL
JD 407
407VAL
VAL
C 40 GLU
0
180
J 564 VAL
J 1209 VAL
J 593 ASN
D 555 TYR
B 193 GLU
-180
J 1177 ILE
J 582
D
582 ILE
ILE
0
C 49 LEU
I
L
500 ILE
ILE
F 500
1168GLU
GLU
JD1168
IC 214
214ASN
ASN
I 1203 ASP
7 GLU
J 560 ASN
D
ILE
AD1155
192
564VAL
VAL
L 212 ILE
D 1177 ILE
B
A 320
320 ASN
ASN
C
741 MET
MET
I 741
JD 462
462ASP
ASP
J 528 THR
L
F 307 THR
IC 748
748ILE
ILE
-180
0
180
Glycine
180
Psi
1149 ARG
ARG
JD 1149
Phi
D
906 GLY
GLY
J 906
D 858 VAL
J 522 GLY
JD833
833GLU
GLU
0
0
D 828 GLY
J 1161 GLY
G
H 29
29 GLU
GLU
J 587 LEU
EK 36
36ASP
ASP
I 891 GLY
JD1190
1190ILE
ILE
-180
-180
1204LEU
LEU
IC1204
-180
0
Phi
180
Trans proline
180
834 PRO
PRO
DJ 834
CI 1181
1181 PRO
PRO
JDD1185
PRO
1185
PRO
1191
PRO
420
PRO
J 1191
PRO
JD 420
H
PRO
G
30
PRO
B 30 PRO
A 30 PRO
D 859 PRO
0
Phi
180
Cis proline
180
JD1150
1150PRO
PRO
J 859 PRO
D 1214 PRO
J 1153
D
1153 PRO
PRO
Psi
Psi
J 588 PRO
D 588 PRO
C 110 PRO
K 40 PRO
0
-180
FL 490
490 PRO
PRO
J 1214 PRO
0
E 40 PRO
K 37 PRO
A 323 PRO
E 37 PRO
-180
I 110
PRO
JD 851
PRO
851
PRO
-180
92.5% (6491/7019) of all residues were in favored (98%) regions.
97.6% (6853/7019) of all residues were in allowed (>99.8%) regions.
There were 166 outliers (phi, psi):
A 30 PRO (-112.2, 128.0)
A 93 GLN (-46.9, -87.4)
A 188 GLU (29.4, 119.3)
A 191 ARG (-75.5, -132.3)
A 192 VAL (70.9, 123.4)
A 229 GLU (-49.4, 59.3)
A 230 ALA (56.1, -179.6)
A 319 GLU (25.6, 100.7)
A 320 ASN (126.9, 58.9)
A 323 PRO (-63.1, -81.9)
B 7 GLU (-176.8, -34.0)
0
Phi
180
F 490 PRO (75.9, 7.6)
F 500 ILE (-65.3, 86.7)
F 606 VAL (87.2, -67.5)
G 29 GLU (-77.1, -81.6)
H
H
H
I 110 PRO (77.9, -175.9)
I 114 VAL (-69.3, -87.2)
I 169 LYS (59.3, 103.1)
I 214 ASN (110.6, 24.7)
29 GLU (-75.5, -81.6)
30 PRO (-108.8, 143.1)
93 GLN (-48.7, -88.0)
B 320 ASN (125.1, 58.3)
C 9 LYS (49.5, 82.4)
C 40 GLU (46.8, -159.8)
C 49 LEU (58.2, -31.9)
I 346 TYR (39.6, -59.9)
I 741 MET (29.0, 50.0)
I 746 ALA (91.9, 120.3)
I 748 ILE (144.0, 161.4)
C 61 SER (34.2, -107.7)
C 110 PRO (-154.9, 17.1)
C 114 VAL (-67.7, -164.6)
I 891 GLY (-67.7, -129.0)
I 941 LYS (64.8, 126.2)
I 1155 VAL (-40.2, -66.1)
I 1181 PRO (-109.0, 163.7)
I 1203 ASP (90.3, 18.5)
I 1204 LEU (73.3, -178.6)
J 151 MET (110.7, -161.5)
J 407 VAL (81.8, -11.5)
J 420 PRO (-123.0, 143.2)
J 462 ASP (-68.7, 18.1)
C 940 GLU (-60.2, 78.0)
C 1040 ASP (174.3, -74.2)
C 1154 ASP (-56.8, 78.1)
C 1155 VAL (44.6, -69.1)
J 522 GLY (166.5, 28.5)
J 528 THR (-48.4, 11.2)
J 539 SER (-46.9, -103.0)
J 557 LYS (-61.3, 77.2)
C 1181 PRO (-111.2, 160.8)
C 1204 LEU (73.2, -177.5)
D 148 GLU (65.2, 103.9)
J 560 ASN (-171.0, -69.3)
J 564 VAL (72.6, 43.5)
J 582 ILE (-70.8, 61.4)
D 151 MET (112.4, -162.9)
D 179 LYS (-62.3, 90.5)
D 407 VAL (81.1, -13.6)
D 420 PRO (-121.4, 145.1)
J 587 LEU (55.1, -111.7)
J 588 PRO (47.8, 54.7)
J 593 ASN (71.0, -135.1)
J 596 LEU (61.0, 142.1)
D 462 ASP (-66.3, 17.9)
D 539 SER (-45.7, -100.0)
D 555 TYR (84.1, -142.4)
D 564 VAL (76.5, 119.7)
J 718 SER (88.9, 149.1)
J 833 GLU (72.9, 19.4)
J 834 PRO (-106.9, 175.8)
J 851 PRO (62.8, -176.3)
D 582 ILE (-72.6, 57.3)
D 588 PRO (-151.3, 50.1)
D 595 ALA (55.8, 91.1)
-180
G 30 PRO (-108.5, 142.8)
G 93 GLN (-48.8, -87.6)
G 188 GLU (30.4, 121.2)
G 231 PHE (42.5, -60.1)
H 188 GLU (30.3, 121.3)
I 9 LYS (-61.1, -97.5)
I 40 GLU (53.8, 91.1)
B 192 VAL (75.3, -175.8)
B 193 GLU (-65.7, -168.2)
B 195 ARG (172.4, -39.4)
B 319 GLU (24.4, 96.9)
D 718 SER (87.7, 146.8)
D 825 VAL (62.7, -0.9)
D 828 GLY (-178.5, -42.7)
D 833 GLU (76.6, 17.8)
-180
180
E 80 LEU (46.0, -81.0)
F 307 THR (-51.5, -2.0)
F 488 LEU (153.5, -165.7)
B 157 THR (-38.6, -77.1)
B 188 GLU (30.6, 119.0)
B 191 ARG (-74.6, -124.0)
C 214 ASN (110.6, 24.0)
C 346 TYR (39.6, -56.5)
C 741 MET (28.4, 50.6)
C 746 ALA (92.9, 119.0)
Phi
E 45 LYS (52.3, -176.1)
E 59 ILE (-78.8, -80.2)
E 60 ASN (64.5, 141.4)
E 79 GLU (53.7, -91.1)
B 13 LEU (66.4, 122.8)
B 30 PRO (-113.6, 133.2)
B 93 GLN (-46.8, -87.6)
C 748 ILE (144.7, 160.0)
C 892 GLU (67.4, 137.2)
C 909 LYS (62.3, 129.5)
0
J 859 PRO (52.1, 127.2)
J 880 VAL (73.2, 154.9)
J 906 GLY (-33.6, 92.4)
J 1149 ARG (-80.2, 83.5)
J 1150 PRO (-27.3, 133.4)
J 1153 PRO (52.5, 103.3)
J 1160 SER (-44.6, -80.1)
D 834 PRO (-112.5, 173.3)
D 851 PRO (62.6, -177.7)
D 858 VAL (-97.9, 32.4)
J 1161 GLY (58.2, -75.4)
J 1168 GLU (164.8, 32.5)
J 1169 THR (-36.9, 98.2)
D 859 PRO (-129.5, 121.8)
D 880 VAL (74.1, 153.4)
D 906 GLY (-34.3, 93.8)
D 1149 ARG (-80.7, 86.6)
J 1176 VAL (60.4, -146.5)
J 1177 ILE (58.1, 84.6)
J 1185 PRO (-135.4, 151.3)
J 1190 ILE (-89.6, -154.8)
D 1150 PRO (-25.9, 133.0)
D 1153 PRO (51.3, 102.4)
D 1155 ILE (68.2, 127.9)
J 1191 PRO (-132.2, 144.9)
J 1209 VAL (-162.0, 10.1)
J 1214 PRO (49.3, -1.3)
D 1160 SER (-57.9, -77.0)
D 1168 GLU (167.4, 34.3)
D 1169 THR (-37.9, 78.9)
D 1176 VAL (62.2, -129.6)
J 1215 GLU (64.1, 144.5)
K 15 ASN (92.1, 158.8)
K 36 ASP (35.1, -131.0)
K 37 PRO (55.0, -71.2)
D 1177 ILE (83.0, 102.8)
D 1185 PRO (-135.4, 150.2)
D 1190 ILE (-88.8, -155.2)
K 40 PRO (-148.9, 6.6)
K 45 LYS (52.1, 179.5)
K 59 ILE (-78.4, -88.5)
D 1191 PRO (-132.5, 147.4)
D 1208 ASP (71.3, -98.1)
D 1214 PRO (-0.2, 112.8)
E 16 ARG (46.7, -73.2)
K 60 ASN (61.8, 147.3)
L 212 ILE (63.3, 112.3)
L 307 THR (-51.5, -1.8)
L 488 LEU (151.8, -164.2)
E 36 ASP (32.7, -129.9)
E 37 PRO (61.7, -143.6)
E 40 PRO (142.9, 5.4)
L 490 PRO (76.6, 7.4)
L 500 ILE (-65.3, 89.3)
L 606 VAL (84.9, -67.2)
http://kinemage.biochem.duke.edu
Lovell, Davis, et al. Proteins 50:437 (2003)