MolProbity Ramachandran analysis

MolProbity Ramachandran analysis
1W2B, model 1
General case
180
143 ASP
ALA
OHE 83
79LYS
ALA
MO 164
ASP
CBX 164
48
SER
206
THR
169
ARG
N BD
54
93
GLU
LEU
M 183 ASP
139
ASP
23 SER
THR
LP 72
D 95 THR
K 80 ASP D 20 LYS
X V14277SER
ALA
Psi
I
A Z 6918LEU
LYS
2 84 ARG
K
C 21
ARG
HISLYS
I69143
B 291 ASP
LYS
IZ 55
711ASP
C
ARG
N 73 ASP
Isoleucine and valine
180
D 135 VAL
CJ 131
PHE
6 ALA
M 181 ASP
B 67 GLU
A 119 ALA
X 157 ILE
A 55 VAL
W 70 ILE
D 130 VAL
Psi
B 266 ASN
J 126 SER
SW 44
HIS
D
8523ALA
GLN
I 116
89
OZ
29 HIS
THR
SER
H
O
58
77
HIS
ALA
RM
70
105
15GLU
GLU
ALA
BFR
192
30
21ASP
HIS
AA 180
LYS
MET
H F 6761ALA
A
15
QQ107
GLU
40THR
ALA
39ASP
ASP
LD 47
0
5 GLU
A 132 ASP
A 34 ASP
K 13 HIS
89
ALA
A184
SER
R
NL
38
145
20
ALA
ALA
SER
S14 16
LEU
YCE165
59
HIS
46
LEU
L
B
SER
76
ASP ASP
YI 20
LEU
H 72 VAL
0
D 96 SER
L 140 ALA
Y 18 TYR
K 150 GLN
L 88 VAL
K 11 ARG
U 65 ASP
F 59 ILE
C 21 VAL
G I 20
78VAL
ILE
A 170 VAL
Y 41 VAL
R 4 VAL
D 174 VAL
R 83 VAL
M 154 LEU
D 173 GLU
M 162 ASP E 17 HIS
W 77 PHE
D 171 ASP
W F 87
ALA
101
ALA
144
ARG
ND 21
SER
-180
-180
0
Phi
180
Pre-proline
180
D 27 ILE
Q 2 ILE
-180
-180
0
B
2 GLN
180
Glycine
180
Z
Psi
Phi
2 GLY
Psi
0
0
B 185 GLY
A 10 GLY
H 162 SER
H 110 GLY
Q 106 GLY
2 57 GLY
B 169 GLY
P 78 GLY
B 34 GLY
Y 15 GLY
A 211 LYS
-180
S 53 GLY
-180
-180
0
Phi
180
Trans proline
180
-180
0
Phi
180
Phi
180
Cis proline
180
B B 30302
PRO
PRO
KM 459PRO
PRO
2
56 PRO
H 118 PRO
Psi
0
P
H 40 PRO
Psi
B 91 PRO
P 54 PRO
L 110 PRO
0
U 43 PRO
PRO
6 PRO WD 52
137PRO
PRO
P 18
L 35 PRO
-180
-180
-180
83.0% (3056/3680) of all residues were in favored (98%) regions.
96.2% (3541/3680) of all residues were in allowed (>99.8%) regions.
I 76 ASP (-54.7, -83.2)
I 78 ILE (-23.5, -48.8)
There were 139 outliers (phi, psi):
2 56 PRO (-22.1, 129.0)
2 57 GLY (-60.8, -88.1)
2 84 ARG (-51.7, 91.9)
A 10 GLY (-25.5, -51.2)
I 89 HIS (-51.9, 1.9)
I 143 LYS (-46.1, 85.0)
J 6 ALA (172.6, 142.7)
J 126 SER (-65.3, 24.4)
K 11 ARG (55.7, -59.5)
K 13 HIS (38.1, 32.8)
A 14 SER (-28.8, -75.4)
A 15 THR (-27.1, -41.8)
A 21 HIS (-38.8, -19.0)
A 34 ASP (167.8, 169.8)
K 21 ARG (-63.0, 85.5)
K 45 PRO (-42.4, 160.8)
K 80 ASP (-8.1, 137.0)
K 150 GLN (173.1, -35.2)
A 55 VAL (-173.9, 120.2)
A 69 LEU (-59.3, 97.5)
A 119 ALA (42.4, 84.3)
A 132 ASP (168.4, 178.0)
A 170 VAL (64.4, -38.7)
A 180 LYS (-41.5, -21.9)
L 35 PRO (-60.6, -156.3)
L 46 LEU (-44.5, -78.2)
L 47 ASP (-25.1, -54.1)
L 72 SER (-29.0, 145.0)
L 88 VAL (-149.1, -44.0)
L 110 PRO (-47.5, -7.3)
A 211 LYS (-102.7, -163.0)
B 2 GLN (53.2, 100.2)
B 30 PRO (-47.2, 166.8)
B 34 GLY (-67.6, -134.6)
L 140 ALA (105.7, -28.1)
L 165 SER (-61.0, -80.5)
M 9 PRO (-37.0, 157.6)
M 15 GLU (-43.2, -13.9)
B 67 GLU (179.6, 112.8)
B 91 PRO (-58.7, 10.3)
B 139 ASP (-36.4, 155.8)
B 169 GLY (-41.0, -94.0)
B 184 ASP (-39.4, -80.1)
B 185 GLY (-164.6, -6.1)
M 154 LEU (-50.8, -112.4)
M 162 ASP (17.6, -124.2)
M 164 ASP (44.7, 173.3)
M 181 ASP (164.8, 125.8)
M 183 ASP (42.2, 157.5)
N 20 SER (-47.3, -76.1)
B 192 ASP (-45.2, -17.3)
B 206 THR (-46.8, 164.6)
B 266 ASN (17.1, 62.1)
B 291 ASP (-176.2, 85.3)
N 21 SER (-61.6, -171.9)
N 54 GLU (-44.7, 160.8)
N 73 ASP (-63.6, 49.8)
O 77 ALA (-50.0, -7.6)
B 302 PRO (-38.7, 165.0)
C 21 VAL (-37.1, -34.1)
C 48 SER (-48.7, 166.3)
C 55 ARG (-66.4, 62.3)
C 69 HIS (-62.7, 85.7)
C 89 ALA (-54.3, -73.7)
O 83 LYS (-54.6, 176.2)
O 116 SER (-55.5, 0.8)
O 143 ALA (48.7, 178.8)
P 6 PRO (-83.8, -43.3)
P 18 PRO (-21.2, -51.1)
P 23 THR (-28.0, 146.8)
C 131 PHE (168.2, 146.7)
D 20 LYS (57.0, 137.2)
D 27 ILE (-86.1, -156.1)
D 39 ASP (-22.8, -53.6)
P 54 PRO (-48.6, -1.6)
P 78 GLY (54.2, -97.3)
Q 2 ILE (-80.9, -165.0)
Q 40 ALA (-21.9, -46.9)
D 85 GLN (-61.9, 9.4)
D 93 LEU (-33.6, 160.3)
D 95 THR (46.3, 145.5)
D 96 SER (58.7, -22.1)
D 130 VAL (-155.9, 99.1)
D 135 VAL (-173.1, 173.9)
Q 106 GLY (-30.6, -86.2)
Q 107 GLU (-28.2, -45.6)
R 4 VAL (-66.2, -81.4)
R 30 ASP (-42.3, -18.0)
R 38 ALA (-60.1, -77.0)
R 70 GLU (-48.6, -11.7)
D 137 PRO (-18.0, -46.2)
D 144 ARG (-55.3, -168.8)
D 171 ASP (174.1, -167.7)
D 173 GLU (-61.7, -128.7)
D 174 VAL (-23.1, -85.0)
R 83 VAL (33.2, -93.2)
S 16 LEU (-14.7, -76.9)
S 44 ALA (-60.9, 11.5)
S 53 GLY (-47.0, -169.5)
U 43 PRO (-32.5, -25.5)
E 17 HIS (77.3, -122.9)
E 145 ALA (-50.3, -76.7)
E 164 ASP (-47.1, 171.1)
F 59 ILE (-43.9, -19.7)
F 61 MET (-27.8, -31.5)
U 65 ASP (100.4, -73.2)
V 77 ALA (-10.7, 125.5)
W 23 HIS (-56.6, 10.2)
W 52 PRO (-27.9, -40.3)
W 70 ILE (-177.0, 114.4)
F 101 ALA (-46.9, -160.4)
F 105 ALA (-43.9, -13.6)
G 20 VAL (-32.7, -47.9)
H 40 PRO (-51.4, 86.0)
H 58 HIS (-51.1, -7.8)
0
Phi
180
-180
0
W 77 PHE (176.7, -154.2)
W 87 ALA (-56.5, -159.2)
X 142 SER (-18.8, 125.1)
X 157 ILE (-23.5, 121.9)
X 169 ARG (-44.9, 162.4)
H 67 ALA (-36.0, -34.0)
H 72 VAL (-58.0, 19.3)
H 79 ALA (-50.0, 174.4)
H 110 GLY (-175.0, -90.6)
H 118 PRO (-41.6, 107.5)
Y 15 GLY (41.2, -155.4)
Y 18 TYR (89.6, -42.0)
Y 20 LEU (-60.4, -86.0)
Y 41 VAL (-61.6, -76.5)
Y 59 HIS (-59.7, -77.6)
H 162 SER (-110.2, -90.0)
I 5 GLU (59.4, 104.3)
I 7 ASP (-65.7, 64.2)
Z 2 GLY (-30.6, 150.2)
Z 11 LYS (-64.8, 69.9)
Z 18 LYS (-50.9, 95.9)
Z 29 THR (-52.8, -0.1)
http://kinemage.biochem.duke.edu
Lovell, Davis, et al. Proteins 50:437 (2003)