MolProbity Ramachandran analysis

MolProbity Ramachandran analysis
3CQZ, model 1
General case
180
Isoleucine and valine
180
A 465 TYR
A 50 ILE
A 752 LYS
A 1175 SER
B 1156 ASP
A 603BASN
261 ARGA 63 ARG
H 88 SER
B 109 THR
764 CYS
B 1097
HIS A A 62
E 49
L SER
64ALEU
1090
ALA
ASP
B 67AHSER
BA
1157
ALA
1188
GLN
36 CYS
90 ALA
THR
AH 1401
SER
BTHR
368
GLU
A 830 LYS
B
1184
LYS
A1405
1080
THR
A
A831
53
LEU
A 1176 LEU
B 266 ALA B 509 ALAH 139 ASN
A 1387
HIS
A 1400
H CYS
108
SER
A
1256
GLU
H 11 GLN
Psi
A 36 ARG
H 92 ASP
A 453 MET
K 25 THR
BB 735
644 ALA
GLU
A 626 ASN
E 148 GLU
ASP
A B120427
GLU
K 45 LEU
A 1221 LYS
B 426
LYS
B 1166
H
CYS
106 GLU
A 186 LYS
B 1152 MET
B 648 HIS
-180
0
0
A
93 VAL
A 747
VAL
A 1399 ARG
B 105 SER
A 154 SER
B 68 THR
B 645 SER
H 78 SER
A 1254B ALA
104 GLU
E 75 MET
H 83 GLN
A 705
A 70
LYS
CYS
E 74 ASP
Phi
A 599 SER
B 574 SER
-180
-180
0
Phi
180
Glycine
180
I 40 SER
A 157 ASP
Psi
H 107 VAL
180
Pre-proline
180
A 622 VAL
H B77
1180
HARG
51GLN
ALA
E 84 ASP
A
167 CYS
A 1260
LEU
E 8BASN
22 SER
A 409 SER
A LYS
885 THR
B
SER
A 1066
419
A
221
SER
-180
B 108 VAL
A 66 LYS
B 736 THR
BA 746
429
PHE
B
B833
1155
SER
GLU
SER
AA 1159
ARG
71 GLN
B 646 LEU
A 279 LEU
A 958 VAL
Psi
A 1160 SER
H 52 GLN
0
C 10 ILE
Psi
B 23 ALA
B 647 GLY
B 510 LYS
0
0
B 1017 ILE
A 52 GLYH 85 GLY
E 51 GLY
A 1437 GLY
E 52 ARG
-180
-180
-180
0
Phi
180
Trans proline
180
-180
0
Phi
180
Phi
180
Cis proline
180
B 974 PRO
Psi
E 73 PRO
Psi
A 158 PRO
I 76 PRO
0
0
A 1158 PRO
A 674 PRO
E 53 PRO
A 56 PRO
-180
-180
-180
88.3% (2973/3368) of all residues were in favored (98%) regions.
96.4% (3246/3368) of all residues were in allowed (>99.8%) regions.
There were 122 outliers (phi, psi):
A 36 ARG (-177.7, 64.8)
A 50 ILE (74.6, 161.4)
A 52 GLY (-36.3, -87.7)
A 53 LEU (19.0, 88.5)
A 56 PRO (-12.6, -122.6)
A 62 ASP (167.4, 107.3)
A 63 ARG (127.3, 119.9)
A 66 LYS (94.1, 19.4)
A 70 CYS (94.2, -166.5)
A 71 GLN (-166.7, -23.3)
A 93 VAL (-31.9, -58.9)
A 120 GLU (-19.4, -74.7)
A 154 SER (71.7, -93.7)
A 157 ASP (16.7, 132.8)
A 158 PRO (-43.1, 90.3)
A 167 CYS (158.7, -38.5)
A 186 LYS (-178.3, -107.0)
A 221 SER (-32.3, -40.7)
A 279 LEU (-174.2, -40.3)
A 409 SER (-34.7, -23.8)
A 419 LYS (-31.4, -35.3)
A 453 MET (-70.2, 29.9)
A 465 TYR (54.1, 176.9)
A 599 SER (-7.9, 86.5)
A 603 ASN (46.5, 122.8)
A 622 VAL (-150.3, -6.8)
A 626 ASN (-174.6, -88.1)
A 674 PRO (-3.1, -95.2)
A 705 LYS (80.7, -166.2)
A 747 VAL (-29.6, -62.3)
A 752 LYS (120.7, 137.7)
A 764 CYS (175.3, 114.2)
A 830 LYS (134.3, 92.5)
A 831 THR (11.2, 89.9)
A 833 GLU (-51.9, -1.1)
A 885 THR (-10.9, -31.8)
A 958 VAL (64.1, 110.0)
A 1080 THR (2.0, 90.6)
A 1090 ALA (87.9, 107.3)
A 1158 PRO (-23.2, -39.5)
A 1159 ARG (-169.2, -21.0)
A 1160 SER (113.9, 36.3)
A 1175 SER (115.5, 132.0)
A 1176 LEU (34.8, 86.3)
A 1188 GLN (125.6, 99.0)
A 1221 LYS (-9.5, -83.6)
A 1254 ALA (72.3, -139.3)
A 1256 GLU (171.0, 62.6)
A 1260 LEU (160.6, -39.2)
A 1387 HIS (126.9, 70.9)
A 1399 ARG (173.8, -77.0)
A 1400 CYS (112.8, 67.9)
A 1401 SER (169.4, 94.7)
A 1405 THR (-3.1, 95.1)
A 1437 GLY (36.5, -111.1)
B 22 SER (174.8, -48.8)
B 23 ALA (85.0, 86.1)
B 67 SER (101.8, 101.0)
B 68 THR (155.7, -95.0)
0
Phi
180
-180
0
B 104 GLU (101.5, -144.2)
B 105 SER (104.9, -88.5)
B 108 VAL (122.1, 20.2)
B 109 THR (-20.8, 116.8)
B 261 ARG (76.1, 120.5)
B 266 ALA (20.1, 79.5)
B 368 GLU (44.8, 93.1)
B 426 LYS (-61.4, -84.8)
B 427 ASP (-7.7, -71.3)
B 429 PHE (-54.8, 3.1)
B 509 ALA (82.5, 77.3)
B 510 LYS (-98.6, 59.8)
B 574 SER (-179.4, 52.3)
B 644 GLU (-173.6, -63.8)
B 645 SER (102.2, -104.5)
B 646 LEU (-161.7, -30.6)
B 647 GLY (138.2, 78.0)
B 648 HIS (-1.3, -177.8)
B 735 ALA (-176.0, -62.2)
B 736 THR (49.1, 5.6)
B 746 SER (-55.2, -1.3)
B 974 PRO (-33.4, 139.3)
B 1017 ILE (-106.7, -55.9)
B 1066 SER (-32.1, -35.0)
B 1097 HIS (100.6, 112.3)
B 1152 MET (-84.3, -132.6)
B 1155 SER (-39.7, -1.7)
B 1156 ASP (11.5, 129.8)
B 1157 ALA (-12.3, 99.4)
B 1166 CYS (-77.7, -88.3)
B 1180 GLN (152.9, -21.0)
B 1184 LYS (53.3, 91.9)
C 10 ILE (161.4, 141.0)
E 8 ASN (154.6, -47.0)
E 49 SER (43.8, 110.1)
E 51 GLY (56.8, -97.7)
E 52 ARG (76.8, -143.2)
E 53 PRO (-82.1, -127.0)
E 73 PRO (-100.0, 97.7)
E 74 ASP (131.5, -168.2)
E 75 MET (76.6, -147.8)
E 84 ASP (114.1, -32.7)
E 148 GLU (-3.9, -62.7)
H 11 GLN (76.7, 60.8)
H 36 CYS (128.8, 98.2)
H 51 ALA (164.2, -20.4)
H 52 GLN (-170.9, 19.7)
H 77 ARG (140.0, -18.6)
H 78 SER (160.5, -130.7)
H 83 GLN (84.4, -157.9)
H 85 GLY (14.0, -85.1)
H 88 SER (174.9, 120.7)
H 90 ALA (172.4, 98.2)
H 92 ASP (-36.2, 38.8)
H 106 GLU (-43.9, -88.7)
H 107 VAL (92.0, -129.5)
H 108 SER (140.3, 67.8)
H 139 ASN (134.3, 84.5)
I 40 SER (138.3, 135.0)
I 76 PRO (-59.9, 10.0)
K 25 THR (-164.2, -56.5)
K 45 LEU (-58.3, -76.2)
L 64 LEU (63.6, 108.4)
http://kinemage.biochem.duke.edu
Lovell, Davis, et al. Proteins 50:437 (2003)